Transcript: SMIM2-AS1:4

Basic information

LNCipedia transcript ID: SMIM2-AS1:4 
LNCipedia gene ID: SMIM2-AS1
Location (hg38): chr13:44142328-44154075
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1192 bp
Exons: 5
Sources: Refseq - Dec 2014
Alternative transcript names: NR_104064
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.8548 non-coding 
CPAT coding probability 8.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM2-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERP2-1:5
4.0 SMIM2-AS1:4
4.1 SMIM2-AS1:4
5.0 SMIM2-AS1:4
5.1 SMIM2-AS1:4
5.2 SMIM2-AS1:4