Transcript: SNHG19:2

Basic information

LNCipedia transcript ID: SNHG19:2 
HGNC Gene Symbol: SNHG19    
HGNC Full Gene Name: small nucleolar RNA host gene 19
Ensembl Gene ID: ENSG00000260260
Ensembl Transcript ID: ENST00000563192
Location (hg38): chr16:2154797-2155358
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 342 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000563192.1; RP11-304L19.5-001; OTTHUMT00000434795.1; NONHSAT140311
Alternative gene names: ENSG00000260260.1; RP11-304L19.5; OTTHUMG00000177010.1; SNHG19; SNORD60HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SNHG19:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PKD1-1:1
4.0 SNHG19:2
4.1 SNHG19:2
5.0 SNHG19:2
5.1 SNHG19:2
5.2 SNHG19:2