Transcript: SNHG20:3
Basic information
LNCipedia transcript ID: SNHG20:3
HGNC Gene Symbol: SNHG20
HGNC Full Gene Name:
small nucleolar RNA host gene 20
Ensembl Gene ID:
ENSG00000234912
Ensembl Transcript ID:
ENST00000568363
Location (hg38): chr17:77086716-77093762
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 786 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000568363.1; LINC00338-003; OTTHUMT00000436188.1; NONHSAT056104; ENST00000568363.5
Alternative gene names: ENSG00000234912.3; LINC00338; OTTHUMG00000132169.4; ENSG00000234912.5; ENSG00000234912.9; SNHG20; PRO0872; FLJ25582; DKFZp686L05235; SCARNA16HG; ENSG00000234912.10; ENSG00000234912.11
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Liu (2017), Long non-coding RNA SNHG20 predicts a poor prognosis for HCC and promotes cell invasion by regulating the epithelial-to-mesenchymal transition., Biomed. Pharmacother.
- Schattner (2006), A computational screen for mammalian pseudouridylation guide H/ACA RNAs., RNA
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 3.1 | lnc-SEC14L1-1:2 |
| 4.0 | SNHG20:3 |
| 4.1 | SNHG20:3 |
| 5.0 | SNHG20:3 |
| 5.1 | SNHG20:3 |
| 5.2 | SNHG20:3 |