Transcript: SNHG21:5

Basic information

LNCipedia transcript ID: SNHG21:5 
LNCipedia gene ID: SNHG21
RefSeq ID: NR_110099
Location (hg38): chr15:82750564-82755037
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 694 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110099; NR_110099.1
Alternative gene names: SCARNA15HG; FSD2-AS1; RP11-752G15.6; SNHG21


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -118.9862 non-coding 
CPAT coding probability 2.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SNHG21:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WHAMM-2:10
4.0 SNHG21:5
4.1 SNHG21:5
5.0 SNHG21:5
5.1 SNHG21:5
5.2 SNHG21:5