Transcript: SNHG3:3
Basic information
LNCipedia transcript ID: SNHG3:3
HGNC Gene Symbol: SNHG3
HGNC Full Gene Name:
small nucleolar RNA host gene 3
Ensembl Gene ID:
ENSG00000242125
Ensembl Transcript ID:
ENST00000413987
Location (hg38): chr1:28505980-28510892
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2201 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413987.1; SNHG3-001; OTTHUMT00000010373.1
Alternative gene names: ENSG00000242125.1; SNHG3; OTTHUMG00000003657.1; ENSG00000242125.2; ENSG00000242125.3; U17HG; U17HG-A; NCRNA00014
RNA sequence:
Structure:
Protein coding potential
In stringent set: no
Locus conservation
Available literature
- Ichigozaki (2016), Serum long non-coding RNA, snoRNA host gene 5 level as a new tumor marker of malignant melanoma., Exp. Dermatol.
- Zhang (2016), SNHG3 correlates with malignant status and poor prognosis in hepatocellular carcinoma., Tumour Biol.
- Guo (2015), Competing endogenous RNA networks and gastric cancer., World J. Gastroenterol.
- Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.
- Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE
- Pelczar (1998), The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5'-terminal oligopyrimidine gene family., Mol. Cell. Biol.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
3.1 | lnc-PHACTR4-2:1 |
4.0 | SNHG3:3 |
4.1 | SNHG3:3 |
5.0 | SNHG3:3 |
5.1 | SNHG3:3 |
5.2 | SNHG3:3 |