Transcript: SNHG9:2

Basic information

LNCipedia transcript ID: SNHG9:2 
HGNC Gene Symbol: SNHG9    
HGNC Full Gene Name: small nucleolar RNA host gene 9
Ensembl Gene ID: ENSG00000255198
Ensembl Transcript ID: ENST00000531523
Location (hg38): chr16:1964959-1965509
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 275 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000531523.1; SNHG9-001; OTTHUMT00000387781.1
Alternative gene names: ENSG00000255198.2; SNHG9; OTTHUMG00000166082.2; ENSG00000255198.3; ENSG00000255198.4; DKFZp686N06141; NCRNA00062


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SNHG9:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF151-1:1
4.0 SNHG9:2
4.1 SNHG9:2
5.0 SNHG9:2
5.1 SNHG9:2
5.2 SNHG9:2