Transcript: SNRK-AS1:1

Basic information

LNCipedia transcript ID: SNRK-AS1:1 
LNCipedia gene ID: SNRK-AS1
Location (hg38): chr3:43351300-43352568
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1053 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00007152; NONHSAT089289
Alternative gene names: XLOC_003102; linc-C3orf39;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.7697 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SNRK-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANO10-1:1
3.1 lnc-ANO10-1:1
4.0 SNRK-AS1:1
4.1 SNRK-AS1:1
5.0 SNRK-AS1:1
5.1 SNRK-AS1:1
5.2 SNRK-AS1:1