Transcript: SNRK-AS1:3

Basic information

LNCipedia transcript ID: SNRK-AS1:3 
LNCipedia gene ID: SNRK-AS1
RefSeq ID: NR_046757
Location (hg38): chr3:43346919-43351962
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3475 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT089287; NR_046757; NR_046757.1
Alternative gene names: ; SNRK-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1052.9938 coding 
CPAT coding probability 86.44% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SNRK-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANO10-1:3
4.0 SNRK-AS1:3
4.1 SNRK-AS1:3
5.0 SNRK-AS1:3
5.1 SNRK-AS1:3
5.2 SNRK-AS1:3