Transcript: SORCS3-AS1:2

Basic information

LNCipedia transcript ID: SORCS3-AS1:2 
LNCipedia gene ID: SORCS3-AS1
Location (hg38): chr10:104664610-104666216
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1520 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT016244
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -148.7882 non-coding 
CPAT coding probability 9.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SORCS3-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITPRIP-3:3
4.0 SORCS3-AS1:2
4.1 SORCS3-AS1:2
5.0 SORCS3-AS1:2
5.1 SORCS3-AS1:2
5.2 SORCS3-AS1:2