Transcript: SOX21-AS1:2
Basic information
LNCipedia transcript ID: SOX21-AS1:2
LNCipedia gene ID: SOX21-AS1
Location (hg38): chr13:94712716-94714495
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1536 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000438290; ENST00000438290.1; SOX21-AS1-001; OTTHUMT00000045471.1
Alternative gene names: ENSG00000227640; SOX21-AS1; ENSG00000227640.1; OTTHUMG00000017213.1;
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ||||
---|---|---|---|---|
SOX21-AS1:2 | no | no | no | no |
Available literature
- Lu (2017), A Novel Long Non-Coding RNA, SOX21-AS1, Indicates a Poor Prognosis and Promotes Lung Adenocarcinoma Proliferation., Cell. Physiol. Biochem.
- Yang (2016), Aberrant DNA hypermethylation-silenced SOX21-AS1 gene expression and its clinical importance in oral cancer., Clin Epigenetics
- Hezroni (2015), Principles of long noncoding RNA evolution derived from direct comparison of transcriptomes in 17 species., Cell Rep
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-GPR180-1:2 |
3.1 | lnc-GPR180-1:1 |
4.0 | SOX21-AS1:2 |
4.1 | SOX21-AS1:2 |
5.0 | SOX21-AS1:2 |
5.1 | SOX21-AS1:2 |
5.2 | SOX21-AS1:2 |