Transcript: SP2-AS1:11

Basic information

LNCipedia transcript ID: SP2-AS1:11 
LNCipedia gene ID: SP2-AS1
Location (hg38): chr17:47891248-47895926
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 617 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA611:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.2213 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SP2-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 SP2-AS1:11
4.1 SP2-AS1:11
5.0 SP2-AS1:11
5.1 SP2-AS1:11
5.2 SP2-AS1:11