Transcript: SP2-AS1:13

Basic information

LNCipedia transcript ID: SP2-AS1:13 
LNCipedia gene ID: SP2-AS1
Location (hg38): chr17:47891290-47895806
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 396 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT054338
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.2213 non-coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SP2-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRR15L-5:11
4.0 SP2-AS1:13
4.1 SP2-AS1:13
5.0 SP2-AS1:13
5.1 SP2-AS1:13
5.2 SP2-AS1:13