Transcript: SP2-AS1:19

Basic information

LNCipedia transcript ID: SP2-AS1:19 
LNCipedia gene ID: SP2-AS1
Location (hg38): chr17:47898785-47941392
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1771 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234494.3|ENST00000411573.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.8418 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SP2-AS1:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SP2-AS1:19
5.0 SP2-AS1:19
5.1 SP2-AS1:19
5.2 SP2-AS1:19