Transcript: SP2-AS1:28

Basic information

LNCipedia transcript ID: SP2-AS1:28 
LNCipedia gene ID: SP2-AS1
RefSeq ID: NR_135480
Location (hg38): chr17:47891229-47895816
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 526 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135480.1
Alternative gene names: LOC102724532


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.2213 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SP2-AS1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 SP2-AS1:28
5.1 SP2-AS1:28
5.2 SP2-AS1:28