Transcript: SPAG5-AS1:6

Basic information

LNCipedia transcript ID: SPAG5-AS1:6 
LNCipedia gene ID: SPAG5-AS1
Location (hg38): chr17:28599281-28600296
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1016 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT052594
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.3821 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SPAG5-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SUPT6H-2:7
4.0 SPAG5-AS1:6
4.1 SPAG5-AS1:6
5.0 SPAG5-AS1:6
5.1 SPAG5-AS1:6
5.2 SPAG5-AS1:6