Transcript: SREBF2-AS1:7

Basic information

LNCipedia transcript ID: SREBF2-AS1:7 
LNCipedia gene ID: SREBF2-AS1
Location (hg38): chr22:41830547-41832878
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2332 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000184068.2|FTMT28600001233.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.0409 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SREBF2-AS1:7 no no no no

Available literature

  1. Luo (2018), Long non-coding RNAs RP5-821D11.7, APCDD1L-AS1 and RP11-277P12.9 were associated with the prognosis of lung squamous cell carcinoma., Mol Med Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SHISA8-1:3
5.0 lnc-SHISA8-1:3
5.1 SREBF2-AS1:4
5.2 SREBF2-AS1:7