Transcript: SRGAP3-AS3:1

Basic information

LNCipedia transcript ID: SRGAP3-AS3:1 
LNCipedia gene ID: SRGAP3-AS3
Location (hg38): chr3:9216518-9217996
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 738 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087749
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.517 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRGAP3-AS3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THUMPD3-2:3
4.0 SRGAP3-AS3:1
4.1 SRGAP3-AS3:1
5.0 SRGAP3-AS3:1
5.1 SRGAP3-AS3:1
5.2 SRGAP3-AS3:1