Transcript: SRP14-AS1:12

Basic information

LNCipedia transcript ID: SRP14-AS1:12 
LNCipedia gene ID: SRP14-AS1
Location (hg38): chr15:40039349-40056983
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 652 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000560341.1; RP11-521C20.4-002; OTTHUMT00000418270.1
Alternative gene names: ENSG00000248508.2; RP11-521C20.4; OTTHUMG00000172392.1; SRP14-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.8817 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRP14-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF2AK4-2:5
4.0 SRP14-AS1:12
4.1 SRP14-AS1:12
5.0 SRP14-AS1:12
5.1 SRP14-AS1:12
5.2 SRP14-AS1:12