Transcript: SRP14-AS1:18

Basic information

LNCipedia transcript ID: SRP14-AS1:18 
LNCipedia gene ID: SRP14-AS1
Location (hg38): chr15:40045957-40058426
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2087 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023370; NONHSAT041801
Alternative gene names: XLOC_011219; linc-BUB1B;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.1415 non-coding 
CPAT coding probability 2.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRP14-AS1:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EIF2AK4-2:7
3.1 lnc-EIF2AK4-2:8
4.0 SRP14-AS1:18
4.1 SRP14-AS1:18
5.0 SRP14-AS1:18
5.1 SRP14-AS1:18
5.2 SRP14-AS1:18