Transcript: SRRM2-AS1:2

Basic information

LNCipedia transcript ID: SRRM2-AS1:2 
HGNC Gene Symbol: SRRM2-AS1    
HGNC Full Gene Name: SRRM2 antisense RNA 1
Ensembl Gene ID: ENSG00000205913
Ensembl Transcript ID: ENST00000573802
Location (hg38): chr16:2737103-2752600
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 818 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000573802.1; CTD-2270P14.3-004; OTTHUMT00000436409.1
Alternative gene names: ENSG00000205913.2; CTD-2270P14.3; OTTHUMG00000177357.1; SRRM2-AS1; ENSG00000205913.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.9914 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRRM2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092117.1-1:1
4.0 SRRM2-AS1:2
4.1 SRRM2-AS1:2
5.0 SRRM2-AS1:2
5.1 SRRM2-AS1:2
5.2 SRRM2-AS1:2