Transcript: SRRM2-AS1:21

Basic information

LNCipedia transcript ID: SRRM2-AS1:21 
LNCipedia gene ID: SRRM2-AS1
Location (hg38): chr16:2737103-2752561
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 779 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000205913.2|ENST00000573802.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.9914 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRRM2-AS1:21 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SRRM2-AS1:21
5.0 SRRM2-AS1:21
5.1 SRRM2-AS1:21
5.2 SRRM2-AS1:21