Transcript: SSBP3-AS1:2

Basic information

LNCipedia transcript ID: SSBP3-AS1:2 
LNCipedia gene ID: SSBP3-AS1
RefSeq ID: NR_103541
Location (hg38): chr1:54236443-54239063
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2621 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT003368; NR_103541; NR_103541.1
Alternative gene names: MSTP128; SSBP3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.6186 non-coding 
CPAT coding probability 87.46% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SSBP3-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf191-2:1
4.0 SSBP3-AS1:2
4.1 SSBP3-AS1:2
5.0 SSBP3-AS1:2
5.1 SSBP3-AS1:2
5.2 SSBP3-AS1:2