Transcript: SSSCA1-AS1:3

Basic information

LNCipedia transcript ID: SSSCA1-AS1:3 
LNCipedia gene ID: SSSCA1-AS1
RefSeq ID: NR_038923
Location (hg38): chr11:65569220-65570413
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1194 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT022169; NR_038923; NR_038923.1
Alternative gene names: ; SSSCA1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -400.2111 non-coding 
CPAT coding probability 12.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SSSCA1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LTBP3-1:4
4.0 SSSCA1-AS1:3
4.1 SSSCA1-AS1:3
5.0 SSSCA1-AS1:3
5.1 SSSCA1-AS1:3
5.2 SSSCA1-AS1:3