Transcript: ST6GAL2-IT1:1

Basic information

LNCipedia transcript ID: ST6GAL2-IT1:1 
HGNC Gene Symbol: ST6GAL2-IT1    
HGNC Full Gene Name: ST6GAL2 intronic transcript 1
Ensembl Gene ID: ENSG00000238250
Ensembl Transcript ID: ENST00000446058
Location (hg38): chr2:106822923-106825031
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 388 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000446058.1; ST6GAL2-IT1-001; OTTHUMT00000330062.1; NONHSAT073049
Alternative gene names: ENSG00000238250.1; ST6GAL2-IT1; OTTHUMG00000153201.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -342.7842 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ST6GAL2-IT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RGPD3-2:1
4.0 ST6GAL2-IT1:1
4.1 ST6GAL2-IT1:1
5.0 ST6GAL2-IT1:1
5.1 ST6GAL2-IT1:1
5.2 ST6GAL2-IT1:1