Transcript: STARD13-AS:39

Basic information

LNCipedia transcript ID: STARD13-AS:39 
LNCipedia gene ID: STARD13-AS
Location (hg38): chr13:33277553-33281334
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 546 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000424853.1; STARD13-AS2-001; OTTHUMT00000044443.1; NONHSAT033133
Alternative gene names: ENSG00000236581.1; STARD13-AS2; OTTHUMG00000016710.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -326.1546 non-coding 
CPAT coding probability 8.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STARD13-AS:39 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KL-2:1
4.0 STARD13-AS:39
4.1 STARD13-AS:39
5.0 STARD13-AS:39
5.1 STARD13-AS:39
5.2 STARD13-AS:39