Transcript: STEAP3-AS1:1

Basic information

LNCipedia transcript ID: STEAP3-AS1:1 
HGNC Gene Symbol: STEAP3-AS1    
HGNC Full Gene Name: STEAP3 antisense RNA 1
Ensembl Gene ID: ENSG00000229867
Ensembl Transcript ID: ENST00000454260
RefSeq ID: NR_046721
Location (hg38): chr2:119244422-119249071
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3218 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000454260.1; STEAP3-AS1-001; OTTHUMT00000330581.1; NONHSAT073950; NR_046721.1
Alternative gene names: ENSG00000229867.1; STEAP3-AS1; OTTHUMG00000153297.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 97.9897 coding 
CPAT coding probability 69.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
STEAP3-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C2orf76-2:1
4.0 STEAP3-AS1:1
4.1 STEAP3-AS1:1
5.0 STEAP3-AS1:1
5.1 STEAP3-AS1:1
5.2 STEAP3-AS1:1