Transcript: STK32A-AS1:13

Basic information

LNCipedia transcript ID: STK32A-AS1:13 
LNCipedia gene ID: STK32A-AS1
Location (hg38): chr5:147173038-147234878
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 8499 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250343.1|ENCT00000363825.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.1979 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STK32A-AS1:13 no no no no

Available literature

  1. Wang (2017), Long non-coding RNA CTA sensitizes osteosarcoma cells to doxorubicin through inhibition of autophagy., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPP2R2B-2:5
5.0 lnc-PPP2R2B-2:5
5.1 STK32A-AS1:4
5.2 STK32A-AS1:13