Transcript: STK32A-AS1:17

Basic information

LNCipedia transcript ID: STK32A-AS1:17 
LNCipedia gene ID: STK32A-AS1
Location (hg38): chr5:147180392-147210217
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 550 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010527; NONHSAT104420
Alternative gene names: XLOC_005047; linc-PPP2R2B-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -194.7853 non-coding 
CPAT coding probability 2.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STK32A-AS1:17 no no no no

Available literature

  1. Wang (2017), Long non-coding RNA CTA sensitizes osteosarcoma cells to doxorubicin through inhibition of autophagy., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PPP2R2B-2:2
3.1 lnc-PPP2R2B-2:2
4.0 lnc-PPP2R2B-2:2
4.1 lnc-PPP2R2B-2:2
5.0 lnc-PPP2R2B-2:2
5.1 STK32A-AS1:8
5.2 STK32A-AS1:17