Transcript: STT3A-AS1:1

Basic information

LNCipedia transcript ID: STT3A-AS1:1 
LNCipedia gene ID: STT3A-AS1
Location (hg38): chr11:125573456-125592578
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 280 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000532714.1; RP11-791J7.2-002; OTTHUMT00000386782.1
Alternative gene names: ENSG00000254671.1; RP11-791J7.2; OTTHUMG00000165869.1; STT3A-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -252.048 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STT3A-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-791J7.2.1-1:1
4.0 STT3A-AS1:1
4.1 STT3A-AS1:1
5.0 STT3A-AS1:1
5.1 STT3A-AS1:1
5.2 STT3A-AS1:1