Transcript: STT3A-AS1:3

Basic information

LNCipedia transcript ID: STT3A-AS1:3 
LNCipedia gene ID: STT3A-AS1
Location (hg38): chr11:125591148-125592455
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 469 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019792; NONHSAT024964
Alternative gene names: XLOC_009592; linc-FEZ1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.9109 non-coding 
CPAT coding probability 7.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STT3A-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACRV1-1:1
3.1 lnc-RP11-791J7.2.1-1:3
4.0 STT3A-AS1:3
4.1 STT3A-AS1:3
5.0 STT3A-AS1:3
5.1 STT3A-AS1:3
5.2 STT3A-AS1:3