Transcript: SUCLA2-AS1:2

Basic information

LNCipedia transcript ID: SUCLA2-AS1:2 
LNCipedia gene ID: SUCLA2-AS1
Location (hg38): chr13:48001405-48002552
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 536 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227848.1|ENST00000423869.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.0375 non-coding 
CPAT coding probability 12.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SUCLA2-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SUCLA2-AS1:2
5.0 SUCLA2-AS1:2
5.1 SUCLA2-AS1:2
5.2 SUCLA2-AS1:2