Transcript: TAF1A-AS1:4

Basic information

LNCipedia transcript ID: TAF1A-AS1:4 
LNCipedia gene ID: TAF1A-AS1
RefSeq ID: NR_110614
Location (hg38): chr1:222589959-222592633
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 917 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110614; NR_110614.1
Alternative gene names: ; TAF1A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.2198 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TAF1A-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MIA3-2:6
4.0 TAF1A-AS1:4
4.1 TAF1A-AS1:4
5.0 TAF1A-AS1:4
5.1 TAF1A-AS1:4
5.2 TAF1A-AS1:4