Transcript: TAF1A-AS1:9

Basic information

LNCipedia transcript ID: TAF1A-AS1:9 
LNCipedia gene ID: TAF1A-AS1
Location (hg38): chr1:222589962-222593032
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1313 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225265.1|ENST00000413074.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -58.2198 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TAF1A-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TAF1A-AS1:9
5.0 TAF1A-AS1:9
5.1 TAF1A-AS1:9
5.2 TAF1A-AS1:9