Transcript: TAPT1-AS1:15

Basic information

LNCipedia transcript ID: TAPT1-AS1:15 
LNCipedia gene ID: TAPT1-AS1
Location (hg38): chr4:16226663-16258187
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2547 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000263327.2|ENST00000570786.1
Alternative gene names: FLJ39653


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.599 non-coding 
CPAT coding probability 42.57% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TAPT1-AS1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TAPT1-AS1:15
5.0 TAPT1-AS1:15
5.1 TAPT1-AS1:15
5.2 TAPT1-AS1:15