Transcript: TBC1D22A-AS1:1

Basic information

LNCipedia transcript ID: TBC1D22A-AS1:1 
HGNC Gene Symbol: TBC1D22A-AS1    
HGNC Full Gene Name: TBC1D22A antisense RNA 1
Ensembl Gene ID: ENSG00000280080
Ensembl Transcript ID: ENST00000640274
RefSeq ID: NR_122047
Location (hg38): chr22:46914092-46916042
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1951 bp
Exons: 1
Sources: Refseq - Dec 2014; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_122047; ENST00000640274.1; NR_122047.1
Alternative gene names: ; ENSG00000280080.2; TBC1D22A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 14.2474 non-coding 
CPAT coding probability 70.31% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TBC1D22A-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CERK-5:1
4.0 TBC1D22A-AS1:1
4.1 TBC1D22A-AS1:1
5.0 TBC1D22A-AS1:1
5.1 TBC1D22A-AS1:1
5.2 TBC1D22A-AS1:1