Transcript: TBC1D22A-AS1:2

Basic information

LNCipedia transcript ID: TBC1D22A-AS1:2 
LNCipedia gene ID: TBC1D22A-AS1
Ensembl Gene ID: ENSG00000280080
Ensembl Transcript ID: ENST00000625149
Location (hg38): chr22:46915328-46915908
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 581 bp
Exons: 1
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000625149.1
Alternative gene names: ENSG00000280080.2; TBC1D22A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -73.9365 non-coding 
CPAT coding probability 58.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TBC1D22A-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 TBC1D22A-AS1:2
5.1 TBC1D22A-AS1:2
5.2 TBC1D22A-AS1:2