Transcript: TBC1D8-AS1:10

Basic information

LNCipedia transcript ID: TBC1D8-AS1:10 
HGNC Gene Symbol: TBC1D8-AS1    
HGNC Full Gene Name: TBC1 domain family member 8 antisense RNA 1
Ensembl Gene ID: ENSG00000272902
Ensembl Transcript ID: ENST00000610202
RefSeq ID: NR_135594
Location (hg38): chr2:101151660-101155412
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2478 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000610202.2; NR_135594.1
Alternative gene names: ENSG00000272902.2; RP11-299H21.1; TBC1D8-AS1; LOC100506286


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.9743 non-coding 
CPAT coding probability 14.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBC1D8-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C2orf29-1:2
4.1 lnc-C2orf29-1:2
5.0 lnc-C2orf29-1:2
5.1 TBC1D8-AS1:5
5.2 TBC1D8-AS1:10