Transcript: TBX2-AS1:11

Basic information

LNCipedia transcript ID: TBX2-AS1:11 
HGNC Gene Symbol: TBX2-AS1    
HGNC Full Gene Name: TBX2 antisense RNA 1
Ensembl Gene ID: ENSG00000267280
Ensembl Transcript ID: ENST00000591313
Location (hg38): chr17:61393458-61399588
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 640 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT055124; ENST00000591313.1; ENST00000591313.5
Alternative gene names: ENSG00000267280.1; RP11-332H18.4; ENSG00000267280.5; TBX2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -354.3151 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX2-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NACA2-2:8
4.0 TBX2-AS1:11
4.1 TBX2-AS1:11
5.0 TBX2-AS1:11
5.1 TBX2-AS1:11
5.2 TBX2-AS1:11