Transcript: TBX2-AS1:12

Basic information

LNCipedia transcript ID: TBX2-AS1:12 
LNCipedia gene ID: TBX2-AS1
Location (hg38): chr17:61393466-61399419
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 463 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00025724
Alternative gene names: XLOC_012542; linc-APPBP2-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -354.3151 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX2-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NACA2-2:2
3.1 lnc-NACA2-2:2
4.0 TBX2-AS1:12
4.1 TBX2-AS1:12
5.0 TBX2-AS1:12
5.1 TBX2-AS1:12
5.2 TBX2-AS1:12