Transcript: TBX2-AS1:17

Basic information

LNCipedia transcript ID: TBX2-AS1:17 
LNCipedia gene ID: TBX2-AS1
Location (hg38): chr17:61359179-61397110
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 33461 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1653:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 107.5661 coding 
CPAT coding probability 24.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TBX2-AS1:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 TBX2-AS1:17
4.1 TBX2-AS1:17
5.0 TBX2-AS1:17
5.1 TBX2-AS1:17
5.2 TBX2-AS1:17