Transcript: TBX2-AS1:19

Basic information

LNCipedia transcript ID: TBX2-AS1:19 
LNCipedia gene ID: TBX2-AS1
Location (hg38): chr17:61393460-61396846
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1126 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025722; NONHSAT055127
Alternative gene names: XLOC_012542; linc-APPBP2-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -354.3151 non-coding 
CPAT coding probability 8.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX2-AS1:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NACA2-2:5
3.1 lnc-NACA2-2:5
4.0 TBX2-AS1:19
4.1 TBX2-AS1:19
5.0 TBX2-AS1:19
5.1 TBX2-AS1:19
5.2 TBX2-AS1:19