Transcript: TBX2-AS1:20

Basic information

LNCipedia transcript ID: TBX2-AS1:20 
LNCipedia gene ID: TBX2-AS1
Location (hg38): chr17:61392881-61395574
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2694 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002jdy_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -187.998 non-coding 
CPAT coding probability 11.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX2-AS1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NACA2-2:12
4.0 TBX2-AS1:20
4.1 TBX2-AS1:20
5.0 TBX2-AS1:20
5.1 TBX2-AS1:20
5.2 TBX2-AS1:20