Transcript: TBX2-AS1:23

Basic information

LNCipedia transcript ID: TBX2-AS1:23 
LNCipedia gene ID: TBX2-AS1
Location (hg38): chr17:61393372-61400442
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1782 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267280.1|HBMT00000633571.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.5165 non-coding 
CPAT coding probability 96.49% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
TBX2-AS1:23 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TBX2-AS1:23
5.0 TBX2-AS1:23
5.1 TBX2-AS1:23
5.2 TBX2-AS1:23