Transcript: TBX2-AS1:25

Basic information

LNCipedia transcript ID: TBX2-AS1:25 
LNCipedia gene ID: TBX2-AS1
Location (hg38): chr17:61361668-61400346
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 573 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267131.1|ENST00000585765.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -286.2916 non-coding 
CPAT coding probability 10.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX2-AS1:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TBX2-AS1:25
5.0 TBX2-AS1:25
5.1 TBX2-AS1:25
5.2 TBX2-AS1:25