Transcript: TBX5-AS1:7

Basic information

LNCipedia transcript ID: TBX5-AS1:7 
LNCipedia gene ID: TBX5-AS1
Location (hg38): chr12:114411289-114411524
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 222 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000595315.1
Alternative gene names: ENSG00000255399.2; TBX5-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -379.6563 non-coding 
CPAT coding probability 1.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX5-AS1:7 no no no no

Available literature

  1. Wang (2015), The long noncoding RNA LINC01207 promotes proliferation of lung adenocarcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-116D17.1.1-13:7
4.0 TBX5-AS1:7
4.1 TBX5-AS1:7
5.0 TBX5-AS1:7
5.1 TBX5-AS1:7
5.2 TBX5-AS1:7