Transcript: TCF4-AS1:1

Basic information

LNCipedia transcript ID: TCF4-AS1:1 
HGNC Gene Symbol: TCF4-AS1    
HGNC Full Gene Name: TCF4 antisense RNA 1
Ensembl Gene ID: ENSG00000267028
Ensembl Transcript ID: ENST00000587660
RefSeq ID: NR_132985
Location (hg38): chr18:55452533-55482940
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 396 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT059369; ENST00000587660.1; NR_132985.1
Alternative gene names: ENSG00000267028.1; RP11-619L19.1; TCF4-AS1; MIR4529HG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.0309 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TCF4-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB27B-7:1
4.0 TCF4-AS1:1
4.1 TCF4-AS1:1
5.0 TCF4-AS1:1
5.1 TCF4-AS1:1
5.2 TCF4-AS1:1