Transcript: TEX36-AS1:5

Basic information

LNCipedia transcript ID: TEX36-AS1:5 
HGNC Gene Symbol: TEX36-AS1    
HGNC Full Gene Name: TEX36 antisense RNA 1
Ensembl Gene ID: ENSG00000237675
Ensembl Transcript ID: ENST00000431861
Location (hg38): chr10:125574445-125578366
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 383 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000431861.1; RP11-118H17.1-002; OTTHUMT00000050913.1
Alternative gene names: ENSG00000237675.1; RP11-118H17.1; OTTHUMG00000019227.1; TEX36-AS1; ENSG00000237675.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.547 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX36-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf137-2:2
4.0 TEX36-AS1:5
4.1 TEX36-AS1:5
5.0 TEX36-AS1:5
5.1 TEX36-AS1:5
5.2 TEX36-AS1:5