Transcript: TEX41:68

Basic information

LNCipedia transcript ID: TEX41:68 
HGNC Gene Symbol: TEX41    
HGNC Full Gene Name: testis expressed 41
Ensembl Gene ID: ENSG00000226674
Ensembl Transcript ID: ENST00000609705
Location (hg38): chr2:145023228-145182424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 552 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609705.1; ENST00000609705.5
Alternative gene names: ENSG00000226674.4; TEX41; ENSG00000226674.8; DKFZp686O1327; LINC00953; ENSG00000226674.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.0379 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX41:68 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ARHGAP15-6:40
4.0 TEX41:68
4.1 TEX41:68
5.0 TEX41:68
5.1 TEX41:68
5.2 TEX41:68