Transcript: TEX41:99

Basic information

LNCipedia transcript ID: TEX41:99 
LNCipedia gene ID: TEX41
Location (hg38): chr2:145171997-145182649
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 629 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000414195; ENST00000414195.1; AC074093.1-010; OTTHUMT00000332164.1; NONHSAT074829
Alternative gene names: ENSG00000226674; AC074093.1; ENSG00000226674.1; OTTHUMG00000153701.1; DKFZp686O1327; LINC00953


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.074 non-coding 
CPAT coding probability 3.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX41:99 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGAP15-4:10
3.1 lnc-ARHGAP15-6:10
4.0 TEX41:99
4.1 TEX41:99
5.0 TEX41:99
5.1 TEX41:99
5.2 TEX41:99