Transcript: TH2LCRR:5

Basic information

LNCipedia transcript ID: TH2LCRR:5 
LNCipedia gene ID: TH2LCRR
RefSeq ID: NR_132126
Location (hg38): chr5:132638048-132655892
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 392 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_132126.1
Alternative gene names: TH2LCRR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -149.5913 non-coding 
CPAT coding probability 0.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TH2LCRR:5 no no no no

Available literature

  1. Spurlock (2015), Expression and functions of long noncoding RNAs during human T helper cell differentiation., Nat Commun


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 TH2LCRR:5
5.1 TH2LCRR:5
5.2 TH2LCRR:5